MetaGP (MetaGeneProfiler) is a web-based application for detecting
differentially-expressed gene sets (meta genes), rather than individual genes, from the gene set
libraries that are registered in our database. As an input, user can submit either
Gene expression data which are categorized into subtypes of conditioned experiments
(e.g. case-control experiments),
A list of genes (probe identifiers) with the valid p-values which are computed outside of MetaGP.
After submission of input data, MetaGP assigns the integrated p-value to each gene set.
Currently, the gene set libraries support
Gene Ontology (GO) terms. We are further planning to yield a more comprehensive
gene sets, e.g. transcription modules, set of genes involved in the same pathway.
We will also include gene sets in response to feedback by users. For comments, bug reports,
suggestion for improvement, please contact yoshidar& @ism.ac.jp.